Bio-Agents MCP provides microservices for interacting with biological data sources such as PDB and ChEMBL, featuring a natural language interface and API services for structural biology and chemical data queries.
Added on:
Created by:
Mar 23 2025
Bio-Agents MCP provides microservices for interacting with biological data sources such as PDB and ChEMBL, featuring a natural language interface and API services for structural biology and chemical data queries.
Added on:
Created by:
Mar 23 2025
Albert
Featured
What is Bio-Agents MCP?
Bio-Agents MCP is a modular framework of microservices designed to facilitate natural language interaction with complex biological databases. It includes services like Protein Data Bank (PDB) API, ChEMBL chemical database API, and a Language Model (LLM) client for conversational queries. The system allows users to query biological structures, chemical information, and related data efficiently via web interfaces or APIs, supporting research and data analysis in life sciences. Built with FastMCP architecture, it enables independent operation or coordinated deployment through Docker Compose, making biological data accessible, understandable, and usable for scientists, developers, and bioinformaticians.
Who will use Bio-Agents MCP?
- Bioinformaticians
- Researchers
- Data Scientists
- Pharmaceutical Professionals
- Biology Students
How to use the Bio-Agents MCP?
- Step1: Configure environment by copying .env.example to .env
- Step2: Run 'make build' to build Docker images
- Step3: Run 'make up' to start services
- Step4: Launch web interface with 'make run-chainlit'
- Step5: Query biological data using the web UI or APIs
Bio-Agents MCP's Core Features & Benefits
The Core Features
- PDB API Service
- ChEMBL API Service
- LLM Client for Natural Language Processing
The Benefits
- Seamless integration with biological databases
- Natural language query interface
- Modular and scalable architecture
Bio-Agents MCP's Main Use Cases & Applications
- Biological data exploration
- Chemical and drug information retrieval
- Structural biology research
- Bioinformatics tool development
FAQs of Bio-Agents MCP
Developer
- dogeplusplus
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